Insertion junction: CLIP2.004423_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004423
Chromosome:chromosome 3
Location:8360437
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g198950 CGL30 (1 of 3) PTHR31407//PTHR31407:SF18 - FAMILY NOT NAMED // PSBP DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGACGCCACTCGCCCGCGATTCCAGAATGTGCGCTTCGCTCTCGTGCCC
Internal bar code:AGTTGGAGGCAGTACGCTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3211
LEAP-Seq percent confirming:97.619
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAGGTGCACAGCAGGTAG
Suggested primer 2:GAGGGGCAGCAAACCAAAAG