Insertion junction: CLIP2.004507_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004507
Chromosome:chromosome 12
Location:2199212
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509050 PPL1,PSBP3 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407:SF4 - PSBP-LIKE PROTEIN 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGAAACAATTTCAGCAAGGGGCAATACACGTCATGGGTTGAAACTGGC
Internal bar code:GGTGTGGAACAACTGGAATCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:4067
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:98
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:98

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACATTCCCCCAACCCTC
Suggested primer 2:ATTGTTCACGGGTTTGCTGC