Gene: Cre12.g509050
Overview
| Common name: | PPL1,PSBP3 |
| Defline: | PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407:SF4 - PSBP-LIKE PROTEIN 1, CHLOROPLASTIC |
| Description: | Similar to PSBP (oxygen-evolving enhancer protein 2, OEC23); precursor of chloroplast-localized protein, directed to thylakoid lumen by a TAT signal; orthologous to Arabidopsis PPL1, involved in assembly of photoinhibition and PSII repair; the Cyanobacterial ortholog CyanoP binds to the lumenal side; |
| Synonyms: | PPL1,g12371.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_LW11E1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in thylakoid
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre08.g362900 | PSBP4 | Cre12.g509050 | PPL1,PSBP3 | Mackinder et al. 2017 |
| Cre09.g415700 | CAH3 | Cre12.g509050 | PPL1,PSBP3 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre01.g022500 | MME5 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre02.g086850 | Mackinder et al. 2017 | |
| Cre12.g509050 | PPL1,PSBP3 | Cre02.g142146 | HCF244,CGL102 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre03.g145887 | TAT3,TATC,TATC1 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre06.g266900 | LPA1L | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre06.g273700 | HCF136 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre08.g371650 | TATB,TATB1,TAT2 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre12.g498500 | DEG1C,DEG11 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre12.g509050 | PPL1,PSBP3 | Mackinder et al. 2017 |
| Cre12.g509050 | PPL1,PSBP3 | Cre16.g684750 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001125_1 | CLIP2.001125 | intron | 80 | 6.1 |
| CLIP2.001125_2 | CLIP2.001125 | intron | 80 | 6.1 |
| CLIP2.001794_1 | CLIP2.001794 | intron | 80 | 6.1 |
| CLIP2.004206_1 | CLIP2.004206 | intron | 80 | 6.1 |
| CLIP2.004507_1 | CLIP2.004507 | 5'UTR | 80 | 6.1 |
| CLIP2.004507_2 | CLIP2.004507 | 5'UTR | 80 | 6.1 |
| CLIP2.005195_1 | CLIP2.005195 | intron | 80 | 6.1 |
| CLIP2.005195_2 | CLIP2.005195 | intron | 80 | 6.1 |
| CLIP2.007423_1 | CLIP2.007423 | intron | 80 | 6.1 |
| CLIP2.007423_2 | CLIP2.007423 | intron | 80 | 6.1 |
| CLIP2.007634_3 | CLIP2.007634 | CDS | 80 | 6.1 |
| LMJ.RY0402.086848_1 | LMJ.RY0402.086848 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF01789 |
| PANTHER: | PTHR31407 PTHR31407:SF4 |
| KEGG_ec: | |
| KEGG_orthology: | K02717 |
| KOG: | |
| Gene ontology terms:: | GO:0005509, GO:0009523, GO:0009654, GO:0015979, GO:0019898 |
| Best arabidopsis TAIR name: | AT3G55330 |
| Best arabidopsis TAIR symbol: | PPL1 |
| Best arabidopsis TAIR defline: | PsbP-like protein 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.