Insertion junction: CLIP2.004507_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004507
Chromosome:chromosome 12
Location:2199256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g509050 PPL1,PSBP3 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407:SF4 - PSBP-LIKE PROTEIN 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACCAAATTTGGGACCACTCATCCCGAGGTGCATTGTTCCTCTGGCTGAA
Internal bar code:TTCGTTGTCTCGGATAGAGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5810
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGTTCACGGGTTTGCTGC
Suggested primer 2:GCTACATTCCCCCAACCCTC