Insertion junction: LMJ.RY0402.086848_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.086848
Chromosome:chromosome 12
Location:2119349
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g509050 PPL1,PSBP3 PsbP-like protein of thylakoid lumen; (1 of 1) PTHR31407:SF4 - PSBP-LIKE PROTEIN 1, CHLOROPLASTIC 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCGAGGGAGCCTGTGGCTTAGGAGTCGAC
Internal bar code:GATCACAATGCCGTCATTGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:612
LEAP-Seq percent confirming:99.0572
LEAP-Seq n confirming:1471
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGTGGTGTGATGCTATG
Suggested primer 2:GCCAAGGGCCACAACTACTA