Insertion junction: CLIP2.004510_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.004510
Chromosome:chromosome 2
Location:6428724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388372 RAT2,OPR39 tscA RNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGATGCGCAGGCACTGGTGCGGTTGCTACAGGCGCAGAGCGAGCCGC
Internal bar code:GAGTAAGACTGGCGGGGGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3765
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCAACCACAAATCCTT
Suggested primer 2:CTGTGAGCCGGGGTTTAGTT