Insertion junction: CLIP2.004510_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004510
Chromosome:chromosome 2
Location:6428735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388372 RAT2,OPR39 tscA RNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGCCGTCTTCACCAGCCCCAGATTCCAGCTCTACATTCTGCCAGGCAC
Internal bar code:AGTCCAATGATTTGCACGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1988
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:61
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:61

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGAGCCGGGGTTTAGTT
Suggested primer 2:GCACGCAACCACAAATCCTT