Insertion junction: CLIP2.004523_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004523
Chromosome:chromosome 12
Location:5155881
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526701 (1 of 7) PTHR10110 - SODIUM/HYDROGEN EXCHANGER CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCACCGCCAGCAGCAGGATGCCCAGGAAGGCGGTCTGGCTCAGGGCAGCC
Internal bar code:GGGATGTTGGATACAGTCGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:3923
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCGGGTCAAGCTCCTTGA
Suggested primer 2:GGGGTCGGTCAGGTAGTAGT