Gene: Cre12.g526701 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g12978.t1,Cre12.g526701.t1.1
Chromosome:chromosome_12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.076702_2 LMJ.RY0402.076702 sense 3'UTR 95
LMJ.RY0402.103180_1 LMJ.RY0402.103180 sense 3'UTR 73
LMJ.RY0402.109949_1 LMJ.RY0402.109949 antisense intron 73
LMJ.RY0402.120843_1 LMJ.RY0402.120843 sense intron 73
LMJ.RY0402.121330_1 LMJ.RY0402.121330 sense 5'UTR 73
LMJ.RY0402.124805_1 LMJ.RY0402.124805 sense intron 73
LMJ.RY0402.156546_1 LMJ.RY0402.156546 sense 3'UTR 95
LMJ.RY0402.156546_2 LMJ.RY0402.156546 sense 3'UTR 95
LMJ.RY0402.158552_1 LMJ.RY0402.158552 antisense intron 73
LMJ.RY0402.166259_2 LMJ.RY0402.166259 antisense 3'UTR 58
LMJ.RY0402.236752_2 LMJ.RY0402.236752 sense intron 95
LMJ.RY0402.236752_3 LMJ.RY0402.236752 sense intron 95
LMJ.RY0402.239137_2 LMJ.RY0402.239137 antisense intron 73
LMJ.RY0402.242683_1 LMJ.RY0402.242683 sense intron 73
LMJ.RY0402.252378_2 LMJ.RY0402.252378 sense intron 73

Gene Annotations

PFAM:PF00999
PANTHER: PTHR10110:SF20 PTHR10110
KEGG_ec:
KEGG_orthology:
KOG:KOG1965
Gene ontology terms::GO:0006812, GO:0015299, GO:0016021, GO:0055085
Best arabidopsis TAIR name:AT3G06370.1
Best arabidopsis TAIR symbol:ATNHX4,NHX4
Best arabidopsis TAIR defline:sodium hydrogen exchanger 4
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 5 of 11 ( 76% confidence (FDR = 0.24))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.