Insertion junction: CLIP2.005564_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.005564
Chromosome:chromosome 12
Location:5154545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526701 (1 of 7) PTHR10110 - SODIUM/HYDROGEN EXCHANGER intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCTCCGCCAAACCAGCCTACAACGAACCCTTGCTCACTCCCCTCTCC
Internal bar code:TAGTTTCGTGATCGACGGAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1600
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGTCACCCTCATCCCACC
Suggested primer 2:ACTACTACCTGACCGACCCC