Insertion junction: CLIP2.004523_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.004523
Chromosome:chromosome 12
Location:5155887
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g526701 (1 of 7) PTHR10110 - SODIUM/HYDROGEN EXCHANGER CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGTGCTGTCGGGGTACGCCATCCGCCGCACCCGATTCCAGTGGGCCACC
Internal bar code:GGGATGTTGGATACAGTCGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTCGGTCAGGTAGTAGT
Suggested primer 2:GTTCGGGTCAAGCTCCTTGA