Insertion junction: CLIP2.004590_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004590
Chromosome:chromosome 9
Location:1901142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397400 SDR17 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.300//1.3.1.33 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) // Protochlorophyllide reductase / Protochlorophyllide oxidoreductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACTGGCCTTGACACGAGGTGCAGAGATACACACGATGGTGGGGTGTACA
Internal bar code:GTAAGCTTACATAGCCGACGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGGATGTCTGTGAGTC
Suggested primer 2:CCTCATTTCCCCCAACTCCC