Gene: Cre09.g397400
Overview
| Common name: | SDR17 |
| Defline: | Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.300//1.3.1.33 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) // Protochlorophyllide reductase / Protochlorophyllide oxidoreductase |
| Description: | Possble protochlorophyllide reductase or retinol/estradiol 17beta dehydrogenase |
| Synonyms: | Cre09.g397400.t1.1,SDR17,g9334.t1 |
| Chromosome: | chromosome 9 |
Protein Localization
A plasmid for expressing Cre09.g397400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre09.g397400-Venus-3xFLAG
Imaged strain: CSI_LW08E2
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/a few large puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003538_1 | CLIP2.003538 | CDS | 80 | 6.1 |
| CLIP2.003538_2 | CLIP2.003538 | CDS | 80 | 6.1 |
| CLIP2.004590_1 | CLIP2.004590 | intron | 80 | 6.1 |
| CLIP2.004590_2 | CLIP2.004590 | intron | 80 | 6.1 |
| CLIP2.006445_1 | CLIP2.006445 | intron | 63 | 6.1 |
| CLIP2.006469_2 | CLIP2.006469 | 3'UTR | 80 | 6.1 |
| CLIP2.006986_1 | CLIP2.006986 | CDS | 80 | 6.1 |
| CLIP2.006986_2 | CLIP2.006986 | CDS | 80 | 6.1 |
| LMJ.RY0402.217055_1 | LMJ.RY0402.217055 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00106 |
| PANTHER: | PTHR24320 |
| KEGG_ec: | EC:1.1.1.300 |
| KEGG_orthology: | K19329 |
| KOG: | KOG1208 |
| Gene ontology terms:: | GO:0008152, GO:0016491 |
| Best arabidopsis TAIR name: | AT4G23430.2 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | NAD(P)-binding Rossmann-fold superfamily protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.