Insertion junction: CLIP2.006986_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.006986
Chromosome:chromosome 9
Location:1900975
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397400 SDR17 Short-chain dehydrogenase/reductase; (1 of 1) 1.1.1.300//1.3.1.33 - NADP-retinol dehydrogenase / Retinol dehydrogenase (NADP(+)) // Protochlorophyllide reductase / Protochlorophyllide oxidoreductase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGGACAATGTTCGATTGGGGGCCACGTCGCTCCTGAACCGACACCCCA
Internal bar code:TCGTTCCCCGGGCATCGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:833
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TATGAGGAGGAAGTGGCCGA
Suggested primer 2:TTCAGCCTTCGCCTCAAGAG