Insertion junction: CLIP2.004596_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004596
Chromosome:chromosome 3
Location:4502434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATAACCAGTCAGGGGAGCCCATGGTAACGCCTCGTCTTACTGCAACGAC
Internal bar code:GTCACGCGGTTCCGGTTCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:35.2941
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCAGATGCACTTCCATGT
Suggested primer 2:AGGGAATTGGGGCTTTAGGC