Insertion junction: CLIP2.004596_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004596
Chromosome:chromosome 3
Location:4502436
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175850 EEP1 (1 of 1) K10771 - AP endonuclease 1 (APEX1); putative exodeoxyribonuclease III intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGTGGAAGCGTCCTCCCCGCCCCCGCCCCGCCGACCTTCTTCAGCAGCG
Internal bar code:GTCACGCGGTTCCGGTTCAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1336
LEAP-Seq percent confirming:69.5652
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGAATTGGGGCTTTAGGC
Suggested primer 2:CCCCAGATGCACTTCCATGT