Insertion junction: CLIP2.004622_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.004622
Chromosome:chromosome 3
Location:4761207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g177700 NIT2 Transcription factor regulating nitrogen metabolism; (1 of 1) IPR001932//IPR003035 - PPM-type phosphatase domain // RWP-RK domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGGGCGCCATCGGCCGCGTGTACTCCACGCTGGAGGTGCGCCGCGGGG
Internal bar code:TGCCGCCCTAACACACACAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2709
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:TACCAATGGTCTGCCCCAAC
Suggested primer 2:CTTGTGAACAACCACTGCCG