Insertion junction: CLIP2.004683_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004683
Chromosome:chromosome 2
Location:2007568
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGGTGTGAGCGGGTTCGGGGGTCGTGCGGGCGGGAGCGCCGGGCGTGT
Internal bar code:GTAGACATGACGTTTCGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1673
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCACACTCAAACACATGT
Suggested primer 2:CTGAGCGAGCTAGCATGTGA