| Insertion cassette: | CIB2 |
| Side of cassette: | 3' |
| Strand: | + |
| Strain: | CLIP2.004753 |
| Chromosome: | chromosome 6 |
| Location: | 5253265 |
| Confidence (%): | 80 |
| Locus systematic id | Locus common name | Defline | Feature |
|---|---|---|---|
| Cre06.g284200 | LHCBM9 | (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII | 5'UTR |
| lncRNA_TCONS_00146666 | 5'UTR |
Insertion site details | |
| Expected flanking sequence (starting at cassette; orientation from cassette outwards): | TGTGGAAGGGCTCAGCCCCTTTTCCCGTGACCGGGGAACACTTGTCCGTG |
| Internal bar code: | TGTCGTCGAGTACGTTGCTCCC |
Confirmation - LEAP-Seq | |
| LEAP-Seq distance: | 2313 |
| LEAP-Seq percent confirming: | 100.0 |
| LEAP-Seq n confirming: | 24 |
| LEAP-Seq n nonconfirming: | 0 |
| LEAP-Seq n unique pos: | 24 |
Suggested primers for confirmation by PCR | |
| Suggested primer 1: | GGACTGCTTCAAGTACGCCT |
| Suggested primer 2: | GGGAGTTGTGAGTGGACCAG |