Gene: Cre06.g284200
Overview
| Common name: | LHCBM9 |
| Defline: | (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chlorophyll a/b binding protein of LHCII |
| Description: | Chlorophyll a-b binding protein of LHCII |
| Synonyms: | Cre06.g284200.t1.1,g6608.t1 |
| Chromosome: | chromosome 6 |
Protein Localization
A plasmid for expressing Cre06.g284200 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre06.g284200-Venus-3xFLAG
Imaged strain: CSI_LW05D12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002944_1 | CLIP2.002944 | CDS | 80 | 6.1 |
| CLIP2.004641_1 | CLIP2.004641 | intron | 80 | 6.1 |
| CLIP2.004641_2 | CLIP2.004641 | intron | 80 | 6.1 |
| CLIP2.004753_1 | CLIP2.004753 | 5'UTR | 80 | 6.1 |
| CLIP2.004753_2 | CLIP2.004753 | 5'UTR | 80 | 6.1 |
| CLIP2.005000_1 | CLIP2.005000 | CDS | 80 | 6.1 |
| CLIP2.006480_1 | CLIP2.006480 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.068261_2 | LMJ.RY0402.068261 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.148496_1 | LMJ.RY0402.148496 | intron | 73 | 5.5 |
| LMJ.RY0402.153606_1 | LMJ.RY0402.153606 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.226354_1 | LMJ.RY0402.226354 | 5'UTR_intron | 73 | 5.5 |
| LMJ.RY0402.241725_2 | LMJ.RY0402.241725 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.251514_1 | LMJ.RY0402.251514 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR21649 PTHR21649:SF8 |
| KEGG_ec: | EC:1.10.3.9 |
| KEGG_orthology: | K08912 |
| KOG: | |
| Gene ontology terms:: | GO:0009765, GO:0016020 |
| Best arabidopsis TAIR name: | AT2G05070.1 |
| Best arabidopsis TAIR symbol: | LHCB2,LHCB2.2 |
| Best arabidopsis TAIR defline: | photosystem II light harvesting complex gene 2.2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.