Insertion junction: CLIP2.004806_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.004806
Chromosome:chromosome 12
Location:1428218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g488500 ARC6 Accumulation and replication of chloroplast; (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAATTCATGTCCTAACACTTCTCCGCCCATGTCCTAAACATCACGGTGCT
Internal bar code:CTCATTAGCTGCCCACACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1871
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:CAACATGCTCAAGGCCATCG
Suggested primer 2:ACTGCACGTAAATCCCAGGG