Insertion junction: CLIP2.004817_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004817
Chromosome:chromosome 9
Location:3049944
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g393765 LMR1 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain 5'UTR
Cre09.g393802 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAAATCGGTCGACACGACCAATGTGAACGCTTCGCGGCGCAGTCTCTT
Internal bar code:GACGCCGAGGCAAGGGTGAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:640
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCGATCTCTGCTCCAATCGC
Suggested primer 2:AGCCTTGTCTTCGGAGGTTG