Insertion junction: CLIP2.004847_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.004847
Chromosome:chromosome 13
Location:2934106
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583550 VIP1,VIPP1 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGTCGGGCGGAAAGCAGGGAAAGGAGGCCCGCCACAGGTGTCAGTCAG
Internal bar code:ATTTAAGTCAGGGGATTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2096
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGTTCAGGCCAGACATCA
Suggested primer 2:AGTACAAGCAGGCACAGACC