Gene: Cre13.g583550

Overview

Common name:VIP1,VIPP1
Defline:(1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1
Description:Plays an important role in thylakoid biogenesis; forms rings that assemble into baskets and rods that tubulate chloroplast membranes; oligomers are assembled and disassembled via the chloroplast HSP70B-CDJ2-CGE1 chaperone system; bridges chloroplast envelopes with thylakoids; forms heterooligomers with VIPP2 under stress, required also to maintain thylakoid membrane integrity under stress
Synonyms:VIP1,g14327.t1,Cre13.g583550.t1.1
Chromosome:chromosome 13

Protein Localization

A plasmid for expressing Cre13.g583550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g583550-Venus-3xFLAG

Imaged strain: CSI_LW03C4

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/homogeneous/not pyrenoid depleted

shapes in cytoplasm/one large patch in cytoplasm

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001136_1 CLIP2.001136 intron 80 6.1
CLIP2.001136_2 CLIP2.001136 intron 80 6.1
CLIP2.001320_3 CLIP2.001320 intron 80 6.1
CLIP2.001320_4 CLIP2.001320 intron 80 6.1
CLIP2.003623_1 CLIP2.003623 CDS 80 6.1
CLIP2.003623_2 CLIP2.003623 CDS 80 6.1
CLIP2.004847_1 CLIP2.004847 intron 80 6.1
CLIP2.004847_2 CLIP2.004847 intron 80 6.1
CLIP2.006953_1 CLIP2.006953 CDS 80 6.1
CLIP2.006953_2 CLIP2.006953 CDS 80 6.1
CLIP2.027221_3 CLIP2.027221 3'UTR 80 6.1
CLIP2.027221_4 CLIP2.027221 3'UTR 80 6.1
CLIP2.059992_1 CLIP2.059992 intron 63 6.1
LMJ.RY0402.075528_1 LMJ.RY0402.075528 3'UTR 58 5.5
LMJ.RY0402.104728_1 LMJ.RY0402.104728 3'UTR 95 5.5
LMJ.RY0402.104728_2 LMJ.RY0402.104728 3'UTR 95 5.5
LMJ.RY0402.110162_1 LMJ.RY0402.110162 3'UTR 73 5.5
LMJ.RY0402.121659_1 LMJ.RY0402.121659 3'UTR 95 5.5
LMJ.RY0402.121659_2 LMJ.RY0402.121659 3'UTR 95 5.5
LMJ.RY0402.157089_1 LMJ.RY0402.157089 3'UTR 95 5.5
LMJ.RY0402.157089_2 LMJ.RY0402.157089 3'UTR 95 5.5

Gene Annotations

PFAM:PF04012
PANTHER: PTHR31088 PTHR31088:SF6
KEGG_ec:
KEGG_orthology:K03969
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT1G65260
Best arabidopsis TAIR symbol:PTAC4,VIPP1
Best arabidopsis TAIR defline:plastid transcriptionally active 4
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.