Insertion junction: CLIP2.004847_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.004847
Chromosome:chromosome 13
Location:2934109
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583550 VIP1,VIPP1 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGATGTAGTCCATCGAGCACCCTGCTGCGCTTTCCCGCAGTGATTCAAA
Internal bar code:ATTTAAGTCAGGGGATTTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1190
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGTACAAGCAGGCACAGACC
Suggested primer 2:GGTGTTCAGGCCAGACATCA