Insertion junction: LMJ.RY0402.075528_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.075528
Chromosome:chromosome 13
Location:2899067
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g583550 VIP1,VIPP1 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCACGGGACGTTCATTTCTTGACAGAGA
Internal bar code:AAAAACACCGCCGGGCAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:369
LEAP-Seq percent confirming:66.5459
LEAP-Seq n confirming:551
LEAP-Seq n nonconfirming:277
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTACAGCTCGGTCACCC
Suggested primer 2:ATGAATTGGCGGTTTACGAG