Insertion junction: LMJ.RY0402.157089_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.157089
Chromosome:chromosome 13
Location:2899076
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g583550 VIP1,VIPP1 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTTGGGATAGCGCACACGGATGTCGGGA
Internal bar code:ATATCACGGTCCGCTGGGGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:808
LEAP-Seq percent confirming:99.0419
LEAP-Seq n confirming:5479
LEAP-Seq n nonconfirming:53
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AATGTACAGCTCGGTCACCC
Suggested primer 2:ATGAATTGGCGGTTTACGAG