Insertion junction: LMJ.RY0402.110162_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.110162
Chromosome:chromosome 13
Location:2899874
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g583550 VIP1,VIPP1 (1 of 2) K03969 - phage shock protein A (pspA); Vesicle inducing protein in plastids 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTTGATATGTGTGTGTGGAATAAGAGC
Internal bar code:TTAAATTATGAACCACTGAACC

Confirmation - LEAP-Seq

LEAP-Seq distance:692
LEAP-Seq percent confirming:98.635
LEAP-Seq n confirming:2240
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CACTCCATTTGCGTCTCTCA
Suggested primer 2:GATGTTGTGGTGTCTGTCGG