Insertion junction: CLIP2.004963_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.004963
Chromosome:chromosome 17
Location:2434154
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714900 CGL11 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAGGCAGAAGTATGAGGGCCTACTGCGATGCCGCTCTCTTACACACG
Internal bar code:CCGGTTCGCCGATGCTGGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3653
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGACTCTGAGAGACCCCG
Suggested primer 2:ATGCTGGTGTGTTTGTGTGC