Insertion junction: CLIP2.004996_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.004996
Chromosome:chromosome 2
Location:6428240
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g388372 RAT2,OPR39 tscA RNA stabilization factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTGGGCTGCTGGCCAGGGCCGGAGTGGCTGGAGGCGCTGGCGTCCGC
Internal bar code:ACCATAAAGGAAGTTGAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3594
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGCAACCACAAATCCTT
Suggested primer 2:TAGAGCTGGAATCTGGGGCT