Insertion junction: CLIP2.005109_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005109
Chromosome:chromosome 5
Location:2350751
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre05.g238332 PSAD,PSAD1 Photosystem I reaction center subunit II, 20 kDa; (1 of 1) K02692 - photosystem I subunit II (psaD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCAGCAGCTGGACCGCCTGTACCATGGAGAAGAGCTTTACTTGCCGGG
Internal bar code:GTCCCATGGAGAGGTAGTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:360
LEAP-Seq percent confirming:45.4545
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAGTATGGCATTGGCAGA
Suggested primer 2:AGGGGGATCTGGGAATTGGA