Insertion junction: CLIP2.005147_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.005147
Chromosome:chromosome 16
Location:2758216
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g662150 CPLD51,CCB1 conserved protein required for cyt b6 assembly; (1 of 1) PF12046 - Protein of unknown function (DUF3529) (DUF3529) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGGTACTTTTCATGGGTTGCTCGTCGGCTCGTAACTGCGTAAGACCTG
Internal bar code:TCGCCTGGGTACCACACTACAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1068
LEAP-Seq percent confirming:96.4286
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CCGCTGAGTTTGAAGTGCAC
Suggested primer 2:GACAAGGAGGAGATCGAGCG