Gene: Cre16.g662150
Overview
| Common name: | CPLD51,CCB1 |
| Defline: | conserved protein required for cyt b6 assembly; (1 of 1) PF12046 - Protein of unknown function (DUF3529) (DUF3529) |
| Description: | involved in heme c covalent linkage to cyt b6; conserved in plant lineage and diatoms (organisms performing oxygenic photosynthesis). Localized to chloroplast. PMID: 17535914 |
| Synonyms: | CPLD51,Cre16.g662150.t1.1,g15990.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2C09
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002815_1 | CLIP2.002815 | 3'UTR | 80 | 6.1 |
| CLIP2.002815_2 | CLIP2.002815 | 3'UTR | 80 | 6.1 |
| CLIP2.005147_1 | CLIP2.005147 | 3'UTR | 80 | 6.1 |
| CLIP2.005147_2 | CLIP2.005147 | 3'UTR | 80 | 6.1 |
| CLIP2.005237_1 | CLIP2.005237 | 3'UTR | 80 | 6.1 |
| CLIP2.005237_2 | CLIP2.005237 | 3'UTR | 80 | 6.1 |
| CLIP2.005315_1 | CLIP2.005315 | 3'UTR | 40 | 6.1 |
| CLIP2.005337_1 | CLIP2.005337 | intron | 63 | 6.1 |
| LMJ.RY0402.126351_1 | LMJ.RY0402.126351 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.146370_2 | LMJ.RY0402.146370 | 3'UTR | 58 | 5.5 |
Gene Annotations
| PFAM: | PF12046 |
| PANTHER: | PTHR35302 PTHR35302:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G26710 |
| Best arabidopsis TAIR symbol: | CCB1 |
| Best arabidopsis TAIR defline: | cofactor assembly of complex C |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.