Insertion junction: CLIP2.005337_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005337
Chromosome:chromosome 16
Location:2757505
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g662150 CPLD51,CCB1 conserved protein required for cyt b6 assembly; (1 of 1) PF12046 - Protein of unknown function (DUF3529) (DUF3529) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCGGCACGCACGTGTAATACACACAACCTTGCCCGCGTGGTGCAGGAGA
Internal bar code:TGAAAGAGGGGTTTGCCGCATT

Confirmation - LEAP-Seq

LEAP-Seq distance:203
LEAP-Seq percent confirming:8.33333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:GCCGCATACGCCTACTACAT
Suggested primer 2:TCACGTACACCTTGCCCTTC