Insertion junction: CLIP2.005156_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.005156
Chromosome:chromosome 16
Location:1278563
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651400 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTAAATGATGACGGCCTGACCATCCACCCGCCATCCGGAACGCGCACCA
Internal bar code:GTGAGCTCCAGGTCTGTTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2593
LEAP-Seq percent confirming:82.8571
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:CTAACCAGCATGCATTCGCC
Suggested primer 2:CGACCCCTCCAGGATCATTG