Gene: Cre16.g651400

Overview

Common name:
Defline:	(1 of 37) PF13639 - Ring finger domain (zf-RING_2)
Description:
Synonyms:	Cre16.g651400.t1.1,g15757.t2
Chromosome:	chromosome 16

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.003051_1	CLIP2.003051	CDS	80	6.1
CLIP2.003051_2	CLIP2.003051	CDS	80	6.1
CLIP2.003086_1	CLIP2.003086	intron	80	6.1
CLIP2.003086_2	CLIP2.003086	intron	80	6.1
CLIP2.004835_1	CLIP2.004835	CDS	80	6.1
CLIP2.004835_2	CLIP2.004835	CDS	80	6.1
CLIP2.005156_1	CLIP2.005156	intron	80	6.1
CLIP2.005156_2	CLIP2.005156	intron	80	6.1
CLIP2.005226_2	CLIP2.005226	intron	80	6.1
CLIP2.005226_3	CLIP2.005226	intron	80	6.1
LMJ.RY0402.038483_1	LMJ.RY0402.038483	intron	95	5.5
LMJ.RY0402.038483_2	LMJ.RY0402.038483	intron	95	5.5
LMJ.RY0402.045067_1	LMJ.RY0402.045067	CDS	73	5.5
LMJ.RY0402.055416_1	LMJ.RY0402.055416	CDS	73	5.5
LMJ.RY0402.079871_1	LMJ.RY0402.079871	intron	73	5.5
LMJ.RY0402.088104_1	LMJ.RY0402.088104	intron	95	5.5
LMJ.RY0402.088104_2	LMJ.RY0402.088104	intron	95	5.5
LMJ.RY0402.126702_1	LMJ.RY0402.126702	CDS	73	5.5
LMJ.RY0402.130172_1	LMJ.RY0402.130172	CDS	73	5.5
LMJ.RY0402.133100_2	LMJ.RY0402.133100	3'UTR	73	5.5
LMJ.RY0402.141979_1	LMJ.RY0402.141979	intron	73	5.5
LMJ.RY0402.161279_1	LMJ.RY0402.161279	CDS	58	5.5
LMJ.RY0402.206812_1	LMJ.RY0402.206812	intron	73	5.5
LMJ.RY0402.222739_1	LMJ.RY0402.222739	3'UTR	73	5.5
LMJ.RY0402.224558_1	LMJ.RY0402.224558	CDS	58	5.5
LMJ.RY0402.230616_2	LMJ.RY0402.230616	intron	73	5.5
LMJ.RY0402.233483_1	LMJ.RY0402.233483	intron	95	5.5
LMJ.RY0402.233483_2	LMJ.RY0402.233483	intron	95	5.5

Gene Annotations

PFAM:	PF13639
PANTHER:	PTHR22765 PTHR22765:SF5
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::	GO:0005515, GO:0008270
Best arabidopsis TAIR name:	AT2G27940.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	RING/U-box superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT027E04, screen 1 of 1 ( 99% confidence (FDR = 0.00096))

LAT030E11, screen 1 of 1 ( 78% confidence (FDR = 0.22))

LAT032H10, screen 1 of 1 ( 76% confidence (FDR = 0.24))

LAT034B04, screen 1 of 1 ( 97% confidence (FDR = 0.026))

LAT034H07, screen 1 of 1 ( 91% confidence (FDR = 0.083))

LAT035G03, screen 1 of 1 ( 79% confidence (FDR = 0.21))

LAT035H07, screen 1 of 1 ( 92% confidence (FDR = 0.076))

Photosynthesis, screen 1 of 5 ( 82% confidence (FDR = 0.18))

Zeocin, screen 2 of 5 ( 95% confidence (FDR = 0.05))

Zeocin, screen 4 of 5 ( 99% confidence (FDR = 0.008))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.