Gene: Cre16.g651400 (Genome version: v5.5)

Overview

Common name:
Defline:
Description:
Synonyms:g15757.t2,Cre16.g651400.t1.1, g15757.t1
Chromosome:chromosome_16

Insertions

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.038483_1 LMJ.RY0402.038483 antisense intron 95
LMJ.RY0402.038483_2 LMJ.RY0402.038483 antisense intron 95
LMJ.RY0402.045067_1 LMJ.RY0402.045067 sense CDS 73
LMJ.RY0402.055416_1 LMJ.RY0402.055416 antisense CDS 73
LMJ.RY0402.079871_1 LMJ.RY0402.079871 antisense intron 73
LMJ.RY0402.088104_1 LMJ.RY0402.088104 antisense intron 95
LMJ.RY0402.088104_2 LMJ.RY0402.088104 antisense intron 95
LMJ.RY0402.126702_1 LMJ.RY0402.126702 antisense CDS 73
LMJ.RY0402.130172_1 LMJ.RY0402.130172 sense CDS 73
LMJ.RY0402.133100_2 LMJ.RY0402.133100 sense 3'UTR 73
LMJ.RY0402.141979_1 LMJ.RY0402.141979 sense intron 73
LMJ.RY0402.161279_1 LMJ.RY0402.161279 sense CDS 58
LMJ.RY0402.206812_1 LMJ.RY0402.206812 sense intron 73
LMJ.RY0402.222739_1 LMJ.RY0402.222739 antisense 3'UTR 73
LMJ.RY0402.224558_1 LMJ.RY0402.224558 antisense CDS 58
LMJ.RY0402.230616_2 LMJ.RY0402.230616 sense intron 73
LMJ.RY0402.233483_1 LMJ.RY0402.233483 antisense intron 95
LMJ.RY0402.233483_2 LMJ.RY0402.233483 sense intron 95

Gene Annotations

PFAM:PF00097
PANTHER: PTHR22764
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT2G27940.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:RING/U-box superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT027E04, screen 1 of 1 ( 99% confidence (FDR = 0.00096))
LAT030E11, screen 1 of 1 ( 78% confidence (FDR = 0.22))
LAT032H10, screen 1 of 1 ( 76% confidence (FDR = 0.24))
LAT034B04, screen 1 of 1 ( 97% confidence (FDR = 0.026))
LAT034H07, screen 1 of 1 ( 91% confidence (FDR = 0.083))
LAT035G03, screen 1 of 1 ( 79% confidence (FDR = 0.21))
LAT035H07, screen 1 of 1 ( 92% confidence (FDR = 0.076))
Photosynthesis, screen 1 of 5 ( 82% confidence (FDR = 0.18))
Zeocin, screen 2 of 5 ( 95% confidence (FDR = 0.05))
Zeocin, screen 4 of 5 ( 99% confidence (FDR = 0.008))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.