Insertion junction: CLIP2.005156_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.005156
Chromosome:chromosome 16
Location:1278582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g651400 (1 of 37) PF13639 - Ring finger domain (zf-RING_2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCCGTCATCATTTAAAACTGTTAGGCTCCCGTGCGCCTAGCCTGCAG
Internal bar code:CTCGAGGGCCTACTAAAGCTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3340
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CGACCCCTCCAGGATCATTG
Suggested primer 2:CTAACCAGCATGCATTCGCC