Insertion junction: CLIP2.005171_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005171
Chromosome:chromosome 1
Location:7495021
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g052750 (1 of 1) PF06011//PF13418 - Transient receptor potential (TRP) ion channel (TRP) // Galactose oxidase, central domain (Kelch_4); Transient receptor potential ion channel intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCCCGCGCTGTGCAATGCGTATCGCCACGCCTTCCCGCAACGGCGTCA
Internal bar code:CTTCCCTATCTCGGCTGCCTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2177
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTACCTGTGAGTGTTGT
Suggested primer 2:AGCAACGTCGTTTAGAGGCA