Gene: Cre01.g052750

Overview

Common name:
Defline:(1 of 1) PF06011//PF13418 - Transient receptor potential (TRP) ion channel (TRP) // Galactose oxidase, central domain (Kelch_4); Transient receptor potential ion channel
Description:Transient receptor potential (TRP) ion channel
Synonyms:g1167.t1
Chromosome:chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.001440_1 CLIP2.001440 intron 80 6.1
CLIP2.001440_2 CLIP2.001440 intron 80 6.1
CLIP2.003588_1 CLIP2.003588 CDS 80 6.1
CLIP2.003588_2 CLIP2.003588 CDS 80 6.1
CLIP2.004830_1 CLIP2.004830 CDS 80 6.1
CLIP2.004830_2 CLIP2.004830 CDS 80 6.1
CLIP2.004966_1 CLIP2.004966 CDS 80 6.1
CLIP2.004966_2 CLIP2.004966 CDS 80 6.1
CLIP2.005171_1 CLIP2.005171 intron 80 6.1
CLIP2.005171_2 CLIP2.005171 intron 80 6.1
LMJ.RY0402.044725_2 LMJ.RY0402.044725 CDS 73 5.5
LMJ.RY0402.046439_1 LMJ.RY0402.046439 CDS 73 5.5
LMJ.RY0402.057884_1 LMJ.RY0402.057884 CDS 95 5.5
LMJ.RY0402.057884_2 LMJ.RY0402.057884 CDS 95 5.5
LMJ.RY0402.082281_1 LMJ.RY0402.082281 intron 95 5.5
LMJ.RY0402.082281_2 LMJ.RY0402.082281 intron 95 5.5
LMJ.RY0402.098393_2 LMJ.RY0402.098393 CDS 73 5.5
LMJ.RY0402.101421_1 LMJ.RY0402.101421 CDS 95 5.5
LMJ.RY0402.101421_2 LMJ.RY0402.101421 CDS 95 5.5
LMJ.RY0402.106644_1 LMJ.RY0402.106644 CDS 73 5.5
LMJ.RY0402.153683_1 LMJ.RY0402.153683 CDS 95 5.5
LMJ.RY0402.153683_2 LMJ.RY0402.153683 intron 95 5.5
LMJ.RY0402.153731_1 LMJ.RY0402.153731 CDS 95 5.5
LMJ.RY0402.153731_2 LMJ.RY0402.153731 CDS 95 5.5
LMJ.RY0402.161635_1 LMJ.RY0402.161635 CDS 95 5.5
LMJ.RY0402.161635_2 LMJ.RY0402.161635 CDS 95 5.5
LMJ.RY0402.164508_1 LMJ.RY0402.164508 CDS 73 5.5
LMJ.RY0402.171391_1 LMJ.RY0402.171391 CDS 73 5.5
LMJ.RY0402.176491_1 LMJ.RY0402.176491 CDS 95 5.5
LMJ.RY0402.176491_2 LMJ.RY0402.176491 CDS 95 5.5
LMJ.RY0402.185770_1 LMJ.RY0402.185770 intron 58 5.5
LMJ.RY0402.197290_1 LMJ.RY0402.197290 intron 95 5.5
LMJ.RY0402.197290_2 LMJ.RY0402.197290 intron 95 5.5
LMJ.RY0402.200269_1 LMJ.RY0402.200269 intron 73 5.5
LMJ.RY0402.233077_1 LMJ.RY0402.233077 CDS 73 5.5
LMJ.RY0402.245980_1 LMJ.RY0402.245980 intron 95 5.5
LMJ.RY0402.245980_2 LMJ.RY0402.245980 intron 95 5.5
LMJ.RY0402.254566_1 LMJ.RY0402.254566 intron 73 5.5
LMJ.RY0402.257024_1 LMJ.RY0402.257024 CDS 73 5.5

Gene Annotations

PFAM:PF06011, PF13418
PANTHER: PTHR11319
KEGG_ec:
KEGG_orthology:
KOG:KOG3903
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 91% confidence (FDR = 0.081))
Paromomycin, screen 6 of 6 ( 70% confidence (FDR = 0.3))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.