Insertion junction: CLIP2.005250_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005250
Chromosome:chromosome 3
Location:4426145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175250 SQS,SQS1 Squalene synthase; (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGCTGGCTGGTGCGGGGCTTCTATAGCTCAGTAGGTAGAGCGTGCGGC
Internal bar code:CGGTAATTTATGCTTTGGGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:824
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCAGCTGGTGGGTAAGAC
Suggested primer 2:GTCAAGGCAGGTGGTATGCT