| Common name: | SQS,SQS1 |
| Defline: | Squalene synthase; (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase |
| Description: | [EC: 2.5.1.21]; produces squalene from farnesyl diphosphate; has two putative transmembrane domains at the C-terminus; localized in ER |
| Synonyms: | SQS,g3618.t2 |
| Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002198_1 | CLIP2.002198 | 3'UTR | 80 | 6.1 |
| CLIP2.002198_2 | CLIP2.002198 | 3'UTR | 80 | 6.1 |
| CLIP2.002673_1 | CLIP2.002673 | 3'UTR | 80 | 6.1 |
| CLIP2.002673_2 | CLIP2.002673 | 3'UTR | 80 | 6.1 |
| CLIP2.003663_1 | CLIP2.003663 | 3'UTR | 80 | 6.1 |
| CLIP2.003663_2 | CLIP2.003663 | 3'UTR | 80 | 6.1 |
| CLIP2.005250_1 | CLIP2.005250 | 3'UTR | 80 | 6.1 |
| CLIP2.005250_2 | CLIP2.005250 | 3'UTR | 80 | 6.1 |
| CLIP2.007070_1 | CLIP2.007070 | 3'UTR | 80 | 6.1 |
| CLIP2.007070_2 | CLIP2.007070 | 3'UTR | 80 | 6.1 |
| CLIP2.046638_1 | CLIP2.046638 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.092824_1 | LMJ.RY0402.092824 | 3'UTR|outside_mRNA | 73 | 5.5 |
| LMJ.RY0402.114651_1 | LMJ.RY0402.114651 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.114651_2 | LMJ.RY0402.114651 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.149230_1 | LMJ.RY0402.149230 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.149230_2 | LMJ.RY0402.149230 | intron | 95 | 5.5 |
| LMJ.RY0402.178416_1 | LMJ.RY0402.178416 | 3'UTR|outside_mRNA | 73 | 5.5 |
| PFAM: | PF00494 |
| PANTHER: | PTHR11626 PTHR11626:SF2 |
| KEGG_ec: | EC:1.3.1.96 EC:2.5.1.21 |
| KEGG_orthology: | K00801 |
| KOG: | KOG1459 |
| Gene ontology terms:: | GO:0004310, GO:0008610, GO:0009058, GO:0016021, GO:0016740 |
| Best arabidopsis TAIR name: | AT4G34640 |
| Best arabidopsis TAIR symbol: | ERG9,SQS1 |
| Best arabidopsis TAIR defline: | squalene synthase 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.