Insertion junction: LMJ.RY0402.149230_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.149230
Chromosome:chromosome 3
Location:4366687
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g175250 SQS,SQS1 Squalene synthase; (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAACAGTTGAGCGCCTATGCATATGAATT
Internal bar code:AGTCCCGATCGGCCTCGGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:236
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTTCTTCCAATTCCGCTT
Suggested primer 2:CTCCTTCTCGATGAACTCCG