Insertion junction: CLIP2.046638_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046638
Chromosome:chromosome 3
Location:4426034
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g175250 SQS,SQS1 Squalene synthase; (1 of 1) 2.5.1.21 - Squalene synthase / Squalene synthetase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCAAAGCCAGGCAATGTGCATCCCTTCACCACCAGCATGGACGCTAACG
Internal bar code:GTAAGAACTCACCCCCGTAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:946
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTCTCCCATGTCTAGTGC
Suggested primer 2:GTCAAGGCAGGTGGTATGCT