Insertion junction: CLIP2.005251_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.005251
Chromosome:chromosome 1
Location:6427583
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g045550 TPT3,APE2 Triose-phosphate transporter; (1 of 1) PTHR11132:SF31 - TRIOSE PHOSPHATE/PHOSPHATE TRANSLOCATOR TPT, CHLOROPLASTIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCATCAGTGGTTGTGTGTTGCGAGGCGCATGCAAGCATGGAAGGGTG
Internal bar code:TGTCAATCATACGAAGGGAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:507
LEAP-Seq percent confirming:23.5294
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCAGCAGGTTGAAGCCGAT
Suggested primer 2:TATGCCCCAAATGCAGCTGA