Insertion junction: CLIP2.005270_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.005270
Chromosome:chromosome 2
Location:1287582
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g082300 SUR6 (1 of 1) PF04935 - Surfeit locus protein 6 (SURF6); Surfeit 6-like protein 3'UTR
Cre02.g082350 CUTA1,CUT1 (1 of 1) K03926 - periplasmic divalent cation tolerance protein (cutA); Copper-binding protein CutA outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAACAAAGACACGACAAGCGCCCCTCAAAACGCCAAAACCATATGACAA
Internal bar code:AGTATATCGAACCTTTATCCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1009
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGATTGACGGTTGCTCCT
Suggested primer 2:AGTTGGGCTGAGTTACGAGC