Gene: Cre02.g082300
Overview
| Common name: | SUR6 |
| Defline: | (1 of 1) PF04935 - Surfeit locus protein 6 (SURF6); Surfeit 6-like protein |
| Description: | putative component of the nucleolar matrix with strong binding capacity for nucleic acids. Surfeit genes are believed to play a role as housekeeping genes. While tightly clustered in vertebrates, surfeit loci seem unlinked in invertebrates |
| Synonyms: | SUR6,Cre02.g082300.t1.1,g1508.t1 |
| Chromosome: | chromosome 2 |
Protein Localization
A plasmid for expressing Cre02.g082300 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre02.g082300-Venus-3xFLAG
Imaged strain: CSI_LW03C11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002655_1 | CLIP2.002655 | 3'UTR | 80 | 6.1 |
| CLIP2.002655_2 | CLIP2.002655 | 3'UTR | 80 | 6.1 |
| CLIP2.002906_1 | CLIP2.002906 | 3'UTR | 80 | 6.1 |
| CLIP2.002906_2 | CLIP2.002906 | 3'UTR | 80 | 6.1 |
| CLIP2.004399_1 | CLIP2.004399 | 3'UTR | 80 | 6.1 |
| CLIP2.004399_2 | CLIP2.004399 | 3'UTR | 80 | 6.1 |
| CLIP2.005270_1 | CLIP2.005270 | 3'UTR | 80 | 6.1 |
| CLIP2.005270_2 | CLIP2.005270 | 3'UTR | 80 | 6.1 |
| CLIP2.005367_1 | CLIP2.005367 | 3'UTR | 80 | 6.1 |
| CLIP2.006425_1 | CLIP2.006425 | CDS | 63 | 6.1 |
| LMJ.RY0402.094127_2 | LMJ.RY0402.094127 | CDS | 58 | 5.5 |
| LMJ.RY0402.109198_1 | LMJ.RY0402.109198 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF04935, PF15459 |
| PANTHER: | PTHR14369 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT5G05210 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Surfeit locus protein 6 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.