Insertion junction: CLIP2.005280_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.005280
Chromosome:chromosome 16
Location:876993
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647950 (1 of 33) IPR015797 - NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCTGCGCATTGCTGCCACAGAGCCACACGGTGCAGTACGACGTGGTAG
Internal bar code:GCACTACTTGCTTCGGTGGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2381
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCACGGCAAAGTAAACTGCA
Suggested primer 2:ACCGTATGTATCCGCAGCAG