Gene: Cre16.g647950
Overview
| Common name: | |
| Defline: | (1 of 33) IPR015797 - NUDIX hydrolase domain-like |
| Description: | |
| Synonyms: | g15683.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g647950 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g647950-Venus-3xFLAG
Imaged strain: CSI_LW05G11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002459_1 | CLIP2.002459 | intron | 80 | 6.1 |
| CLIP2.002459_2 | CLIP2.002459 | intron | 80 | 6.1 |
| CLIP2.005280_1 | CLIP2.005280 | intron | 80 | 6.1 |
| CLIP2.005280_2 | CLIP2.005280 | intron | 80 | 6.1 |
| CLIP2.005406_1 | CLIP2.005406 | intron | 80 | 6.1 |
| CLIP2.005406_2 | CLIP2.005406 | intron | 80 | 6.1 |
| CLIP2.006002_1 | CLIP2.006002 | intron | 80 | 6.1 |
| CLIP2.006002_2 | CLIP2.006002 | intron | 80 | 6.1 |
| CLIP2.006291_1 | CLIP2.006291 | intron | 80 | 6.1 |
| CLIP2.006291_2 | CLIP2.006291 | intron | 80 | 6.1 |
| LMJ.RY0402.134722_1 | LMJ.RY0402.134722 | intron | 95 | 5.5 |
| LMJ.RY0402.134722_2 | LMJ.RY0402.134722 | intron | 95 | 5.5 |
| LMJ.RY0402.142637_1 | LMJ.RY0402.142637 | intron | 73 | 5.5 |
| LMJ.RY0402.254413_3 | LMJ.RY0402.254413 | intron | 95 | 5.5 |
| LMJ.RY0402.254413_4 | LMJ.RY0402.254413 | intron | 95 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0016787 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Mutants in this gene exhibit a phenotype under the following conditions:
| Carbon concentrating mechanism, screen 3 of 11 ( 71% confidence (FDR = 0.29)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.