Insertion junction: CLIP2.006291_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.006291
Chromosome:chromosome 16
Location:876839
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647950 (1 of 33) IPR015797 - NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGTGAATGCCCCACGTCTCCCGACCCGGGCTCGCATGTCAAGATAGC
Internal bar code:TCGGTTACCCACTAGAGTGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:929
LEAP-Seq percent confirming:56.6667
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTATGTATCCGCAGCAG
Suggested primer 2:GCACGGCAAAGTAAACTGCA