Insertion junction: CLIP2.005406_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.005406
Chromosome:chromosome 16
Location:876849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g647950 (1 of 33) IPR015797 - NUDIX hydrolase domain-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATCGCATGTGCGTGAATGCCCCACGTCTCCCGACCCGGGCTCGCATG
Internal bar code:CTAAGCGTGATTTTCTGGGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2735
LEAP-Seq percent confirming:98.3333
LEAP-Seq n confirming:118
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTATGTATCCGCAGCAG
Suggested primer 2:GCACGGCAAAGTAAACTGCA